This data are used as toy data for several functions of learnMET package.

Format

numeric matrix with genotype values stored in a matrix or data.frame for the japonica rice population. Names of lines (geno_ID) are given as row.names and markers as columns. Dimensions are n=321 and p=44,598.

Source

Data from the INIA's Rice Breeding Program (Uruguay). Data downloaded from publication Monteverde et al. (2019).

References

Monteverde E, Gutierrez L, Blanco P, P攼㸹rez de Vida F, Rosas JE, Bonnecarr攼㸸re V, Quero G, McCouch S (2019). “Integrating molecular markers and environmental covariates to interpret genotype by environment interaction in rice (Oryza sativa L.) grown in subtropical areas.” G3: Genes, Genomes, Genetics, 9(5), 1519--1531.
Instituto Nacional de Investigación Agropecuaria (INIA). Programa Arroz. Estación Experimental INIA Treinta y Tres, Uruguay

Author

Cathy C. Westhues cathy.jubin@uni-goettingen.de